Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c11_23220 Pp3c11_23220 |
Chr11 | 15276727 | 15278739 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c11_23220V3.1 Pp3c11_23220V3.1 PAC:32957252 |
High | No | 587 | Get ORF Coding potential... Type: noncoding Potential: -0.932 Folding energies... MFEI: -30.068 AMFE: -0.649 GC content %: 46.337 | |
Ppatens_Pp3c11_23220V3.2 Pp3c11_23220V3.2 PAC:32957253 |
High | No | 829 | Get ORF Coding potential... Type: noncoding Potential: -1.020 Folding energies... MFEI: -28.299 AMFE: -0.645 GC content %: 43.908 |