Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c13_6510 Pp3c13_6510 |
Chr13 | 4283033 | 4283783 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c13_6510V3.1 Pp3c13_6510V3.1 PAC:32930433 |
High | No | 243 | Get ORF Coding potential... Type: noncoding Potential: -0.863 Folding energies... MFEI: -30.329 AMFE: -0.599 GC content %: 50.617 | |
Ppatens_Pp3c13_6510V3.2 Pp3c13_6510V3.2 PAC:32930434 |
High | No | 751 | Get ORF Coding potential... Type: noncoding Potential: -1.183 Folding energies... MFEI: -21.411 AMFE: -0.602 GC content %: 35.553 |