Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c14_7680 Pp3c14_7680 |
Chr14 | 5090900 | 5092054 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c14_7680V3.1 Pp3c14_7680V3.1 PAC:32961507 |
High | No | 906 | Get ORF Coding potential... Type: noncoding Potential: -1.139 Folding energies... MFEI: -29.713 AMFE: -0.665 GC content %: 44.702 | |
Ppatens_Pp3c14_7680V3.2 Pp3c14_7680V3.2 PAC:32961508 |
High | No | 938 | Get ORF Coding potential... Type: noncoding Potential: -1.143 Folding energies... MFEI: -29.861 AMFE: -0.677 GC content %: 44.136 |