Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c16_15900 Pp3c16_15900 |
Chr16 | 9803868 | 9804493 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c16_15900V3.1 Pp3c16_15900V3.1 PAC:32984932 |
High | No | 626 | Get ORF Coding potential... Type: noncoding Potential: -0.738 Folding energies... MFEI: -24.792 AMFE: -0.543 GC content %: 45.687 | |
Ppatens_Pp3c16_15900V3.2 Pp3c16_15900V3.2 PAC:32984933 |
High | No | 300 | Get ORF Coding potential... Type: noncoding Potential: -0.566 Folding energies... MFEI: -22.567 AMFE: -0.509 GC content %: 44.333 |