Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c19_14780 Pp3c19_14780 |
Chr19 | 9786895 | 9787522 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c19_14780V3.1 Pp3c19_14780V3.1 PAC:32939232 |
High | No | 222 | Get ORF Coding potential... Type: noncoding Potential: -0.999 Folding energies... MFEI: -24.099 AMFE: -0.495 GC content %: 48.649 | |
Ppatens_Pp3c19_14780V3.2 Pp3c19_14780V3.2 PAC:32939233 |
High | No | 628 | Get ORF Coding potential... Type: noncoding Potential: -1.341 Folding energies... MFEI: -27.357 AMFE: -0.582 GC content %: 46.975 |