Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c1_16870 Pp3c1_16870 |
Chr01 | 12713603 | 12715145 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c1_16870V3.1 Pp3c1_16870V3.1 PAC:32971165 |
High | No | 1358 | Get ORF Coding potential... Type: noncoding Potential: -0.998 Folding energies... MFEI: -31.576 AMFE: -0.668 GC content %: 47.275 | |
Ppatens_Pp3c1_16870V3.2 Pp3c1_16870V3.2 PAC:32971166 |
High | No | 1543 | Get ORF Coding potential... Type: noncoding Potential: -1.019 Folding energies... MFEI: -31.413 AMFE: -0.669 GC content %: 46.922 |