Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c21_18480 Pp3c21_18480 |
Chr21 | 11959074 | 11959743 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c21_18480V3.1 Pp3c21_18480V3.1 PAC:32916133 |
High | No | 558 | Get ORF Coding potential... Type: noncoding Potential: -1.319 Folding energies... MFEI: -28.781 AMFE: -0.586 GC content %: 49.104 | |
Ppatens_Pp3c21_18480V3.2 Pp3c21_18480V3.2 PAC:32916134 |
High | No | 240 | Get ORF Coding potential... Type: noncoding Potential: -1.291 Folding energies... MFEI: -21.417 AMFE: -0.428 GC content %: 50.000 |