Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c21_22550 Pp3c21_22550 |
Chr21 | 15374790 | 15379300 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c21_22550V3.1 Pp3c21_22550V3.1 PAC:32914476 |
High | No | 554 | Get ORF Coding potential... Type: noncoding Potential: -0.659 Folding energies... MFEI: -25.090 AMFE: -0.607 GC content %: 41.336 | |
Ppatens_Pp3c21_22550V3.2 Pp3c21_22550V3.2 PAC:32914477 |
High | No | 3021 | Get ORF Coding potential... Type: noncoding Potential: -0.751 Folding energies... MFEI: -26.799 AMFE: -0.648 GC content %: 41.344 |