Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c21_9850 Pp3c21_9850 |
Chr21 | 6436310 | 6436896 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c21_9850V3.1 Pp3c21_9850V3.1 PAC:32915878 |
High | No | 222 | Get ORF Coding potential... Type: noncoding Potential: -0.810 Folding energies... MFEI: -14.910 AMFE: -0.509 GC content %: 29.279 | |
Ppatens_Pp3c21_9850V3.2 Pp3c21_9850V3.2 PAC:32915879 |
High | No | 587 | Get ORF Coding potential... Type: noncoding Potential: -1.124 Folding energies... MFEI: -17.002 AMFE: -0.594 GC content %: 28.620 |