Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c24_14080 Pp3c24_14080 |
Chr24 | 9381875 | 9382955 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c24_14080V3.1 Pp3c24_14080V3.1 PAC:32910763 |
High | No | 689 | Get ORF Coding potential... Type: noncoding Potential: -0.890 Folding energies... MFEI: -31.350 AMFE: -0.635 GC content %: 49.347 | |
Ppatens_Pp3c24_14080V3.2 Pp3c24_14080V3.2 PAC:32910764 |
High | No | 864 | Get ORF Coding potential... Type: noncoding Potential: -0.946 Folding energies... MFEI: -30.428 AMFE: -0.649 GC content %: 46.875 |