Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c25_1810 Pp3c25_1810 |
Chr25 | 1166347 | 1167516 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c25_1810V3.1 Pp3c25_1810V3.1 PAC:32979407 |
High | No | 282 | Get ORF Coding potential... Type: noncoding Potential: -1.038 Folding energies... MFEI: -30.355 AMFE: -0.599 GC content %: 50.709 | |
Ppatens_Pp3c25_1810V3.2 Pp3c25_1810V3.2 PAC:32979408 |
High | No | 682 | Get ORF Coding potential... Type: noncoding Potential: -1.258 Folding energies... MFEI: -29.839 AMFE: -0.650 GC content %: 45.894 |