Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c26_11720 Pp3c26_11720 |
Chr26 | 7329373 | 7330922 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c26_11720V3.1 Pp3c26_11720V3.1 PAC:32917018 |
High | No | 836 | Get ORF Coding potential... Type: noncoding Potential: -0.613 Folding energies... MFEI: -30.299 AMFE: -0.651 GC content %: 46.531 | |
Ppatens_Pp3c26_11720V3.2 Pp3c26_11720V3.2 PAC:32917019 |
High | No | 923 | Get ORF Coding potential... Type: noncoding Potential: -0.640 Folding energies... MFEI: -30.867 AMFE: -0.666 GC content %: 46.371 | |
Ppatens_Pp3c26_11720V3.3 Pp3c26_11720V3.3 PAC:32917020 |
High | No | 878 | Get ORF Coding potential... Type: noncoding Potential: -0.561 Folding energies... MFEI: -30.273 AMFE: -0.656 GC content %: 46.128 |