Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c26_1590 Pp3c26_1590 |
Chr26 | 696347 | 697689 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c26_1590V3.1 Pp3c26_1590V3.1 PAC:32917534 |
High | No | 297 | Get ORF Coding potential... Type: noncoding Potential: -0.901 Folding energies... MFEI: -22.795 AMFE: -0.509 GC content %: 44.781 | |
Ppatens_Pp3c26_1590V3.2 Pp3c26_1590V3.2 PAC:32917535 |
High | No | 1182 | Get ORF Coding potential... Type: noncoding Potential: -1.112 Folding energies... MFEI: -29.010 AMFE: -0.658 GC content %: 44.078 |