Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c2_19110 Pp3c2_19110 |
Chr02 | 12318902 | 12320901 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c2_19110V3.1 Pp3c2_19110V3.1 PAC:32937023 |
High | No | 2000 | Get ORF Coding potential... Type: noncoding Potential: -1.100 Folding energies... MFEI: -35.010 AMFE: -0.639 GC content %: 54.750 | |
Ppatens_Pp3c2_19110V3.2 Pp3c2_19110V3.2 PAC:32937024 |
High | No | 548 | Get ORF Coding potential... Type: noncoding Potential: -0.794 Folding energies... MFEI: -40.055 AMFE: -0.669 GC content %: 59.854 |