Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c3_19750 Pp3c3_19750 |
Chr03 | 13578163 | 13579651 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c3_19750V3.1 Pp3c3_19750V3.1 PAC:32941993 |
High | No | 1199 | Get ORF Coding potential... Type: noncoding Potential: -0.994 Folding energies... MFEI: -29.124 AMFE: -0.609 GC content %: 47.790 | |
Ppatens_Pp3c3_19750V3.2 Pp3c3_19750V3.2 PAC:32941994 |
High | No | 1484 | Get ORF Coding potential... Type: noncoding Potential: -1.036 Folding energies... MFEI: -28.652 AMFE: -0.614 GC content %: 46.631 |