Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c3_24600 Pp3c3_24600 |
Chr03 | 16852983 | 16854259 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c3_24600V3.1 Pp3c3_24600V3.1 PAC:32942503 |
High | No | 1277 | Get ORF Coding potential... Type: noncoding Potential: -1.271 Folding energies... MFEI: -27.314 AMFE: -0.645 GC content %: 42.365 | |
Ppatens_Pp3c3_24600V3.2 Pp3c3_24600V3.2 PAC:32942504 |
High | No | 747 | Get ORF Coding potential... Type: noncoding Potential: -1.282 Folding energies... MFEI: -25.823 AMFE: -0.609 GC content %: 42.436 |