Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c3_2570 Pp3c3_2570 |
Chr03 | 1473373 | 1473770 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c3_2570V3.1 Pp3c3_2570V3.1 PAC:32941139 |
High | No | 210 | Get ORF Coding potential... Type: noncoding Potential: -1.329 Folding energies... MFEI: -19.333 AMFE: -0.446 GC content %: 43.333 | |
Ppatens_Pp3c3_2570V3.2 Pp3c3_2570V3.2 PAC:32941140 |
High | No | 398 | Get ORF Coding potential... Type: noncoding Potential: -1.196 Folding energies... MFEI: -17.312 AMFE: -0.436 GC content %: 39.698 |