Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c4_27230 Pp3c4_27230 |
Chr04 | 18678042 | 18679538 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c4_27230V3.1 Pp3c4_27230V3.1 PAC:32918941 |
High | No | 294 | Get ORF Coding potential... Type: noncoding Potential: -0.603 Folding energies... MFEI: -23.776 AMFE: -0.619 GC content %: 38.435 | |
Ppatens_Pp3c4_27230V3.2 Pp3c4_27230V3.2 PAC:32918942 |
High | No | 1497 | Get ORF Coding potential... Type: noncoding Potential: -0.992 Folding energies... MFEI: -26.353 AMFE: -0.639 GC content %: 41.216 |