Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c4_28220 Pp3c4_28220 |
Chr04 | 19396533 | 19397893 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c4_28220V3.1 Pp3c4_28220V3.1 PAC:32920038 |
High | No | 1247 | Get ORF Coding potential... Type: noncoding Potential: -1.125 Folding energies... MFEI: -34.779 AMFE: -0.665 GC content %: 52.285 | |
Ppatens_Pp3c4_28220V3.2 Pp3c4_28220V3.2 PAC:32920039 |
High | No | 252 | Get ORF Coding potential... Type: noncoding Potential: -0.969 Folding energies... MFEI: -29.722 AMFE: -0.594 GC content %: 50.000 |