Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c4_4330 Pp3c4_4330 |
Chr04 | 3166599 | 3168719 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c4_4330V3.1 Pp3c4_4330V3.1 PAC:32922502 |
High | No | 2008 | Get ORF Coding potential... Type: noncoding Potential: -1.324 Folding energies... MFEI: -26.848 AMFE: -0.633 GC content %: 42.430 | |
Ppatens_Pp3c4_4330V3.2 Pp3c4_4330V3.2 PAC:32922503 |
High | No | 529 | Get ORF Coding potential... Type: noncoding Potential: -1.415 Folding energies... MFEI: -28.809 AMFE: -0.622 GC content %: 46.314 |