Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c5_1470 Pp3c5_1470 |
Chr05 | 963675 | 964384 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c5_1470V3.1 Pp3c5_1470V3.1 PAC:32953570 |
High | No | 667 | Get ORF Coding potential... Type: noncoding Potential: -1.445 Folding energies... MFEI: -33.313 AMFE: -0.640 GC content %: 52.024 | |
Ppatens_Pp3c5_1470V3.2 Pp3c5_1470V3.2 PAC:32953571 |
High | No | 709 | Get ORF Coding potential... Type: noncoding Potential: -1.447 Folding energies... MFEI: -34.372 AMFE: -0.659 GC content %: 52.186 |