Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c7_12690 Pp3c7_12690 |
Chr07 | 8594242 | 8595582 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c7_12690V3.1 Pp3c7_12690V3.1 PAC:32925414 |
High | No | 837 | Get ORF Coding potential... Type: noncoding Potential: -0.830 Folding energies... MFEI: -29.940 AMFE: -0.649 GC content %: 46.117 | |
Ppatens_Pp3c7_12690V3.2 Pp3c7_12690V3.2 PAC:32925415 |
High | No | 879 | Get ORF Coding potential... Type: noncoding Potential: -0.840 Folding energies... MFEI: -30.148 AMFE: -0.654 GC content %: 46.075 |