Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c8_13410 Pp3c8_13410 |
Chr08 | 8674219 | 8675321 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c8_13410V3.1 Pp3c8_13410V3.1 PAC:32965310 |
High | No | 760 | Get ORF Coding potential... Type: noncoding Potential: -0.940 Folding energies... MFEI: -29.697 AMFE: -0.662 GC content %: 44.868 | |
Ppatens_Pp3c8_13410V3.2 Pp3c8_13410V3.2 PAC:32965311 |
High | No | 1030 | Get ORF Coding potential... Type: noncoding Potential: -0.945 Folding energies... MFEI: -28.544 AMFE: -0.634 GC content %: 45.049 |