Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c8_19570 Pp3c8_19570 |
Chr08 | 12991582 | 12993283 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c8_19570V3.1 Pp3c8_19570V3.1 PAC:32966168 |
High | No | 470 | Get ORF Coding potential... Type: noncoding Potential: -0.425 Folding energies... MFEI: -29.021 AMFE: -0.643 GC content %: 45.106 | |
Ppatens_Pp3c8_19570V3.2 Pp3c8_19570V3.2 PAC:32966169 |
High | No | 1128 | Get ORF Coding potential... Type: noncoding Potential: -0.660 Folding energies... MFEI: -29.486 AMFE: -0.669 GC content %: 44.060 |