Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c8_21690 Pp3c8_21690 |
Chr08 | 14877269 | 14878395 | Phytozome | v3.3 | Physcomitrella_patens | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c8_21690V3.2 Pp3c8_21690V3.2 PAC:32966503 |
High | No | 237 | Get ORF Coding potential... Type: noncoding Potential: -0.931 Folding energies... MFEI: -22.532 AMFE: -0.473 GC content %: 47.679 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ppatens_Pp3c8_21690V3.2 | RepBase (RepeatMasker) | 2014-01-31 | Novosib-6_CR |