Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppersica_Prupe.2G132900 Prupe.2G132900 |
Pp02 | 19100094 | 19103130 | Phytozome | v2.1 | Prunus_persica | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppersica_Prupe.2G132900.1 Prupe.2G132900.1 PAC:32077529 |
High | No | 1965 | Get ORF Coding potential... Type: noncoding Potential: -1.205 Folding energies... MFEI: -24.606 AMFE: -0.679 GC content %: 36.234 | |
Ppersica_Prupe.2G132900.2 Prupe.2G132900.2 PAC:32077531 |
High | No | 1739 | Get ORF Coding potential... Type: noncoding Potential: -1.099 Folding energies... MFEI: -24.267 AMFE: -0.648 GC content %: 37.435 | |
Ppersica_Prupe.2G132900.3 Prupe.2G132900.3 PAC:32077530 |
High | No | 1726 | Get ORF Coding potential... Type: noncoding Potential: -1.098 Folding energies... MFEI: -25.168 AMFE: -0.659 GC content %: 38.181 |