Gene

Ppersica Prupe.6G268600

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Ppersica_Prupe.6G268600
Prupe.6G268600
Pp06 25590620 25591789 Phytozome v2.1 Prunus_persica
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Ppersica_Prupe.6G268600.1
Prupe.6G268600.1
PAC:32087639
High No 933
Coding potential...
Type: noncoding Potential: -1.370
Folding energies...
MFEI: -23.719 AMFE: -0.615
GC content
%: 38.585


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Prupe.6G268600.png