Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ptrichocarpa_Potri.002G193400 Potri.002G193400 |
Chr02 | 15447830 | 15449217 | Phytozome | v3.0 | Populus_trichocarpa | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ptrichocarpa_Potri.002G193400.1 Potri.002G193400.1 PAC:27020991 |
High | No | 631 | Get ORF Coding potential... Type: noncoding Potential: -1.196 Folding energies... MFEI: -23.899 AMFE: -0.608 GC content %: 39.303 | |
Ptrichocarpa_Potri.002G193400.2 Potri.002G193400.2 PAC:27020990 |
High | No | 590 | Get ORF Coding potential... Type: noncoding Potential: -1.185 Folding energies... MFEI: -23.305 AMFE: -0.578 GC content %: 40.339 | |
Ptrichocarpa_Potri.002G193400.3 Potri.002G193400.3 PAC:27020992 |
High | No | 628 | Get ORF Coding potential... Type: noncoding Potential: -1.196 Folding energies... MFEI: -23.682 AMFE: -0.605 GC content %: 39.172 |