Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ptrichocarpa_Potri.013G049200 Potri.013G049200 |
Chr13 | 3582783 | 3585140 | Phytozome | v3.0 | Populus_trichocarpa | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ptrichocarpa_Potri.013G049200.1 Potri.013G049200.1 PAC:26994197 |
High | No | 929 | Get ORF Coding potential... Type: noncoding Potential: -1.037 Folding energies... MFEI: -22.906 AMFE: -0.594 GC content %: 38.536 | |
Ptrichocarpa_Potri.013G049200.2 Potri.013G049200.2 PAC:26994196 |
High | No | 1656 | Get ORF Coding potential... Type: noncoding Potential: -1.127 Folding energies... MFEI: -23.068 AMFE: -0.626 GC content %: 36.836 |