Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ptrichocarpa_Potri.014G011800 Potri.014G011800 |
Chr14 | 1232912 | 1233833 | Phytozome | v3.0 | Populus_trichocarpa | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ptrichocarpa_Potri.014G011800.1 Potri.014G011800.1 PAC:27034768 |
High | No | 427 | Get ORF Coding potential... Type: noncoding Potential: -0.328 Folding energies... MFEI: -25.855 AMFE: -0.613 GC content %: 42.155 | |
Ptrichocarpa_Potri.014G011800.2 Potri.014G011800.2 PAC:27034767 |
High | No | 412 | Get ORF Coding potential... Type: noncoding Potential: -0.317 Folding energies... MFEI: -25.874 AMFE: -0.613 GC content %: 42.233 |