Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ptrichocarpa_Potri.014G061700 Potri.014G061700 |
Chr14 | 4770634 | 4771147 | Phytozome | v3.0 | Populus_trichocarpa | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ptrichocarpa_Potri.014G061700.1 Potri.014G061700.1 PAC:27033052 |
High | No | 354 | Get ORF Coding potential... Type: noncoding Potential: -0.360 Folding energies... MFEI: -27.881 AMFE: -0.564 GC content %: 49.435 | |
Ptrichocarpa_Potri.014G061700.2 Potri.014G061700.2 PAC:27033053 |
High | No | 327 | Get ORF Coding potential... Type: noncoding Potential: -0.476 Folding energies... MFEI: -28.960 AMFE: -0.564 GC content %: 51.376 |