Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ptrichocarpa_Potri.014G179200 Potri.014G179200 |
Chr14 | 14737518 | 14739116 | Phytozome | v3.0 | Populus_trichocarpa | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ptrichocarpa_Potri.014G179200.1 Potri.014G179200.1 PAC:27032735 |
High | No | 1481 | Get ORF Coding potential... Type: noncoding Potential: -1.023 Folding energies... MFEI: -23.795 AMFE: -0.627 GC content %: 37.947 | |
Ptrichocarpa_Potri.014G179200.2 Potri.014G179200.2 PAC:27032736 |
High | No | 611 | Get ORF Coding potential... Type: noncoding Potential: -0.841 Folding energies... MFEI: -23.404 AMFE: -0.565 GC content %: 41.408 |