Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Rcommunis_30147.t000166 30147.t000166 |
30147 | 3183596 | 3186009 | Phytozome | v0.1 | Ricinus_communis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Rcommunis_30147.m013895 30147.m013895 PAC:16819911 |
Low | No | 1187 | Get ORF Coding potential... Type: noncoding Potential: -1.293 Folding energies... MFEI: -31.769 AMFE: -0.732 GC content %: 43.387 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Rcommunis_30147.m013895 | SwissProt | 2015-06-01 | Q94A02 | 2.0e-12 |