Gene

Rcommunis 30226.t000043

From GreeNC


Gene information
Help.png

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Rcommunis_30226.t000043
30226.t000043
30226 1372184 1372634 Phytozome v0.1 Ricinus_communis
Coding?
No


Transcript features
Help.png

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Rcommunis_30226.m002019
30226.m002019
PAC:16824263
High No 204
Coding potential...
Type: noncoding Potential: -0.740
Folding energies...
MFEI: -19.510 AMFE: -0.491
GC content
%: 39.706


Gene models
Help.png

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

30226.t000043.png