Gene

Rcommunis 40142.t000003

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Rcommunis_40142.t000003
40142.t000003
40142 844 1147 Phytozome v0.1 Ricinus_communis
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Rcommunis_40142.m000033
40142.m000033
PAC:16827288
High No 304
Coding potential...
Type: noncoding Potential: -0.937
Folding energies...
MFEI: -48.487 AMFE: -0.644
GC content
%: 75.329


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

40142.t000003.png