Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Sbicolor_Sobic.001G038450 Sobic.001G038450 |
Chr01 | 2875946 | 2878341 | Phytozome | v3.1 | Sorghum_bicolor | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Sbicolor_Sobic.001G038450.1 Sobic.001G038450.1 PAC:32754628 |
Low | Yes | 727 | Get ORF Coding potential... Type: noncoding Potential: -1.361 Folding energies... MFEI: -35.089 AMFE: -0.664 GC content %: 52.820 | |
Sbicolor_Sobic.001G038450.2 Sobic.001G038450.2 PAC:32754629 |
Low | Yes | 663 | Get ORF Coding potential... Type: noncoding Potential: -1.355 Folding energies... MFEI: -35.038 AMFE: -0.660 GC content %: 53.092 |