Gene

Sbicolor Sobic.001G329701

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Sbicolor_Sobic.001G329701
Sobic.001G329701
Chr01 61731731 61733649 Phytozome v3.1 Sorghum_bicolor
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Sbicolor_Sobic.001G329701.1
Sobic.001G329701.1
PAC:32756099
High No 1025
Coding potential...
Type: noncoding Potential: -1.051
Folding energies...
MFEI: -30.223 AMFE: -0.576
GC content
%: 52.488


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Sobic.001G329701.png