Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Sbicolor_Sobic.007G108800 Sobic.007G108800 |
Chr07 | 39096342 | 39097208 | Phytozome | v3.1 | Sorghum_bicolor | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Sbicolor_Sobic.007G108800.1 Sobic.007G108800.1 PAC:32750547 |
High | No | 754 | Get ORF Coding potential... Type: noncoding Potential: -1.029 Folding energies... MFEI: -29.072 AMFE: -0.654 GC content %: 44.430 | |
Sbicolor_Sobic.007G108800.2 Sobic.007G108800.2 PAC:32750549 |
High | No | 705 | Get ORF Coding potential... Type: noncoding Potential: -1.011 Folding energies... MFEI: -28.000 AMFE: -0.637 GC content %: 43.972 | |
Sbicolor_Sobic.007G108800.3 Sobic.007G108800.3 PAC:32750548 |
High | No | 491 | Get ORF Coding potential... Type: noncoding Potential: -0.907 Folding energies... MFEI: -30.346 AMFE: -0.662 GC content %: 45.825 |