Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Sitalica_Seita.1G055600 Seita.1G055600 |
scaffold_1 | 5370179 | 5371118 | Phytozome | v2.2 | Setaria_italica | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Sitalica_Seita.1G055600.1 Seita.1G055600.1 PAC:32697628 |
High | No | 537 | Get ORF Coding potential... Type: noncoding Potential: -1.122 Folding energies... MFEI: -26.723 AMFE: -0.598 GC content %: 44.693 | |
Sitalica_Seita.1G055600.2 Seita.1G055600.2 PAC:32697629 |
High | No | 507 | Get ORF Coding potential... Type: noncoding Potential: -1.107 Folding energies... MFEI: -25.957 AMFE: -0.580 GC content %: 44.773 |