Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Sitalica_Seita.1G117400 Seita.1G117400 |
scaffold_1 | 10239793 | 10241067 | Phytozome | v2.2 | Setaria_italica | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Sitalica_Seita.1G117400.1 Seita.1G117400.1 PAC:32697042 |
High | No | 788 | Get ORF Coding potential... Type: noncoding Potential: -1.390 Folding energies... MFEI: -28.401 AMFE: -0.643 GC content %: 44.162 | |
Sitalica_Seita.1G117400.2 Seita.1G117400.2 PAC:32697043 |
High | No | 719 | Get ORF Coding potential... Type: noncoding Potential: -1.384 Folding energies... MFEI: -28.067 AMFE: -0.629 GC content %: 44.645 |