Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Sitalica_Seita.2G109000 Seita.2G109000 |
scaffold_2 | 10522878 | 10525549 | Phytozome | v2.2 | Setaria_italica | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Sitalica_Seita.2G109000.1 Seita.2G109000.1 PAC:32719906 |
High | No | 1512 | Get ORF Coding potential... Type: noncoding Potential: -0.535 Folding energies... MFEI: -28.294 AMFE: -0.638 GC content %: 44.378 | |
Sitalica_Seita.2G109000.2 Seita.2G109000.2 PAC:32719907 |
High | No | 1436 | Get ORF Coding potential... Type: noncoding Potential: -0.525 Folding energies... MFEI: -28.280 AMFE: -0.638 GC content %: 44.359 |