Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_38969 38969 |
scaffold_2 | 2173208 | 2173444 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_38969 38969 PAC:15419015 |
Low | No | 237 | Get ORF Coding potential... Type: noncoding Potential: -0.284 Folding energies... MFEI: -19.494 AMFE: -0.491 GC content %: 39.662 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_38969 | SwissProt | 2015-06-01 | Q84V39 | 7.0e-16 |