Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_409524 409524 |
scaffold_10 | 2577452 | 2578625 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_409524 409524 PAC:15403110 |
Low | No | 327 | Get ORF Coding potential... Type: noncoding Potential: -0.670 Folding energies... MFEI: -17.523 AMFE: -0.451 GC content %: 38.838 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_409524 | RepBase (RepeatMasker) | 2014-01-31 | Helitron-2_SMo |