Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_413634 413634 |
scaffold_21 | 765832 | 766458 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_413634 413634 PAC:15416020 |
Low | No | 303 | Get ORF Coding potential... Type: noncoding Potential: -0.520 Folding energies... MFEI: -26.106 AMFE: -0.628 GC content %: 41.584 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_413634 | RepBase (RepeatMasker) | 2014-01-31 | Helitron-2_SMo |