Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_73481 73481 |
scaffold_0 | 3900088 | 3900441 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_73481 73481 PAC:15406939 |
Low | No | 354 | Get ORF Coding potential... Type: noncoding Potential: -0.438 Folding energies... MFEI: -13.277 AMFE: -0.573 GC content %: 23.164 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_73481 | SwissProt | 2015-06-01 | P83886 | 3.0e-11 |