Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_77521 77521 |
scaffold_1 | 5203757 | 5203990 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_77521 77521 PAC:15419345 |
Low | No | 234 | Get ORF Coding potential... Type: noncoding Potential: -0.758 Folding energies... MFEI: -27.650 AMFE: -0.526 GC content %: 52.564 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_77521 | SwissProt | 2015-06-01 | Q5UR45 | 8.0e-5 |