Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_89942 89942 |
scaffold_10 | 873467 | 873670 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_89942 89942 PAC:15413244 |
Low | No | 204 | Get ORF Coding potential... Type: noncoding Potential: -0.238 Folding energies... MFEI: -25.588 AMFE: -0.527 GC content %: 48.529 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_89942 | SwissProt | 2015-06-01 | O82768 | 6.0e-15 |