Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Spolyrhiza_Spipo0G0019100 Spipo0G0019100 |
pseudo0 | 1552684 | 1560286 | Phytozome | v2 | Spirodela_polyrhiza | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Spolyrhiza_Spipo0G0019100 Spipo0G0019100 PAC:31509179 |
Low | Yes | 261 | Get ORF Coding potential... Type: noncoding Potential: -0.609 Folding energies... MFEI: -39.080 AMFE: -0.713 GC content %: 54.789 |