Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Stuberosum_PGSC0003DMG400002633 PGSC0003DMG400002633 |
chr03 | 47660135 | 47662586 | Phytozome | v3.4 | Solanum_tuberosum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Stuberosum_PGSC0003DMT400006792 PGSC0003DMT400006792 PAC:24402313 |
High | No | 385 | Get ORF Coding potential... Type: noncoding Potential: -1.008 Folding energies... MFEI: -20.935 AMFE: -0.534 GC content %: 39.221 | |
Stuberosum_PGSC0003DMT400006793 PGSC0003DMT400006793 PAC:24402312 |
High | No | 369 | Get ORF Coding potential... Type: noncoding Potential: -0.935 Folding energies... MFEI: -21.382 AMFE: -0.552 GC content %: 38.753 |