Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Stuberosum_PGSC0003DMG400015652 PGSC0003DMG400015652 |
chr06 | 26601009 | 26606850 | Phytozome | v3.4 | Solanum_tuberosum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Stuberosum_PGSC0003DMT400040425 PGSC0003DMT400040425 PAC:24395932 |
High | No | 315 | Get ORF Coding potential... Type: noncoding Potential: -0.920 Folding energies... MFEI: -26.730 AMFE: -0.593 GC content %: 45.079 | |
Stuberosum_PGSC0003DMT400040426 PGSC0003DMT400040426 PAC:24395933 |
High | No | 1198 | Get ORF Coding potential... Type: noncoding Potential: -1.090 Folding energies... MFEI: -26.653 AMFE: -0.668 GC content %: 39.900 |